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Pertanika Journal of Tropical Agricultural Science, Volume J, Issue J, January J
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Abdullah, A. L., Yasin, Z., Shutes, B. R., & Fitzsimons, M. (2011). Sediment fallout rates in Tanjung Rhu coral reefs. Kajian Malaysia, 29(2), 1-30.
Béchet, Q., Laviale, M., Arsapin, N., Bonnefond, H., & Bernard, O. (2017). Modeling the impact of high temperatures on microalgal viability and photosynthetic activity. Biotechnology for Biofuels, 10, Article 136. https://doi.org/10.1186/s13068-017-0823-z
Cahoon, L. B., Nearhoof, J. E., & Tilton, C. L. (1999). Sediment grain size effect on benthic microalgal biomass in shallow aquatic ecosystems. Estuaries, 22, 735-741. https://doi.org/10.2307/1353106
Cartaxana, P., Ribeiro, L., Goessling, J. W., Cruz, S., & Kühl, M. (2016). Light and O2 microenvironments in two contrasting diatom-dominated coastal sediments. Marine Ecology Progress Series, 545, 35-47. https://doi.org/10.3354/meps11630
Cartaxana, P., Ruivo, M., Hubas, C., Davidson, I., Serôdio, J., & Jesus, B. (2011). Physiological versus behavioral photoprotection in intertidal epipelic and epipsammic benthic diatom communities. Journal of Experimental Marine Biology and Ecology, 405(1-2), 120-127. https://doi.org/10.1016/j.jembe.2011.05.027
Chen, M., Qi, H., Intasen, W., Kanchanapant, A., Wang, C., & Zhang, A. (2020). Distributions of diatoms in surface sediments from the Chanthaburi coast, Gulf of Thailand, and correlations with environmental factors. Regional Studies in Marine Science, 34, Article 100991. https://doi.org/10.1016/j.rsma.2019.100991
Clarke, K. R., & Gorley, R. N. (2015). User Manual/Tutorial. Primer-E Ltd. http://updates.primer-e.com/primer7/manuals/User_manual_v7a.pdf
Consalvey, M., Perkins, R. G., Paterson, D. M., & Underwood, G. J. C. (2005). PAM fluorescence: A beginners guide for benthic diatomists. Diatom Research, 20(1), 1-22. https://doi.org/10.1080/0269249X.2005.9705619
Cunningham, L., Stark, J. J. S., Snape, I., McMinn, A., & Riddle, M. J. (2003). Effects of metal and petroleum hydrocarbon contamination on benthic diatom communities near Casey Station, Antarctica: An expermintal approach. Journal of Phycology, 39(3), 490-503. https://doi.org/10.1046/j.1529-8817.2003.01251.x
Dalu, T., Richoux, N. B., & Froneman, P. W. (2016). Distribution of benthic diatom communities in a permanently open temperate estuary in relation to physico-chemical variables. South African Journal of Botany, 107, 31-38. https://doi.org/10.1016/j.sajb.2015.06.004
Darif, N. A. N. A. M., Samad, N. S. N. S. A., Salleh, S., Mohammad, M., Nordin, N. A. N. A. A., Javeed, A. M. A. M. M., Jonik, M. G. G. M. G. G., & Zainudin, M. H. M. (2016). The abundance and spatial distribution of soft sediment communities in Tanjung Bungah, Malaysia: A preliminary study. Tropical Life Sciences Research, 27, 71-77. https://doi.org/10.21315/tlsr2016.27.3.10
De Troch, M., Vergaerde, I., Cnudde, C., Vanormelingen, P., Vyverman, W., & Vincx, M. (2012). The taste of diatoms: The role of diatom growth phase characteristics and associated bacteria for benthic copepod grazing. Aquatic Microbial Ecology, 67(1), 47-58. https://doi.org/10.3354/ame01587
Domingues, N., Matos, A. R., da Silva, J. M., & Cartaxana, P. (2012). Response of the diatom phaeodactylum tricornutum to photooxidative stress resulting from high light exposure. PLoS ONE, 7(6), Article e38162. https://doi.org/10.1371/journal.pone.0038162
Du, G., Chung, I. kyo, & Xu, H. (2016). Insights into community-based bioassessment of environmental quality status using microphytobenthos in estuarine intertidal ecosystems. Acta Oceanologica Sinica, 35, 112-120. https://doi.org/10.1007/s13131-016-0874-1
Du, G., Son, M., Yun, M., An, S., & Chung, I. K. (2009). Microphytobenthic biomass and species composition in intertidal flats of the Nakdong River estuary, Korea. Estuarine, Coastal and Shelf Science, 82(4), 663-672. https://doi.org/10.1016/j.ecss.2009.03.004
Figueroa, F. L., Jerez, C. G., & Korbee, N. (2013). Use of in vivo chlorophyll fluorescence to estimate photosynthetic activity and biomass productivity in microalgae grown in different culture systems. Latin American Journal of Aquatic Research, 41(5), 801-819.
Folk, R. (1954). The distinction between grain size and mineral composition in sedimentary-rock nomenclature. The Journal of Geology, 62(4), 344-359.
Goss, R., & Lepetit, B. (2015). Biodiversity of NPQ. Journal of Plant Physiology, 172, 13-32. https://doi.org/10.1016/j.jplph.2014.03.004
Grinham, A., Gale, D., & Udy, J. (2011). Impact of sediment type, light and nutrient availability on benthic diatom communities of a large estuarine bay: Moreton Bay, Australia. Journal of Paleolimnology, 46, 511-523. https://doi.org/10.1007/s10933-010-9407-7
Häusler, S., Weber, M., de Beer, D., & Ionescu, D. (2014). Spatial distribution of diatom and cyanobacterial mats in the Dead Sea is determined by response to rapid salinity fluctuations. Extremophiles, 18, 1085-1094. https://doi.org/10.1007/s00792-014-0686-1
Hing, L. S., Hii, Y. S., Yong, J. C., & Shazili, N. A. M. (2012). A Handbook for Basic Water Quality Analysis. Penerbit Universiti Malaysia Terengganu.
Holm-Hansen, O., & Lorenzen, C. (1965). Fluorometric determination of chlorophyll. ICES Journal of Marine Science, 30(1), 3-15. https://doi.org/10.1093/icesjms/30.1.3
Jesus, B., Brotas, V., Ribeiro, L., Mendes, C. R., Cartaxana, P., & Paterson, D. M. (2009). Adaptations of microphytobenthos assemblages to sediment type and tidal position. Continental Shelf Research, 29(13), 1624-1634. https://doi.org/10.1016/j.csr.2009.05.006
Jesus, B., Perkins, R. G., Mendes, C. R., Brotas, V., & Paterson, D. M. (2006). Chlorophyll fluorescence as a proxy for microphytobenthic biomass: Alternatives to the current methodology. Marine Biology, 150, 17-28. https://doi.org/10.1007/s00227-006-0324-2
Jordan, L., McMinn, A., & Thompson, P. (2010). Diurnal changes of photoadaptive pigments in microphytobenthos. Journal of the Marine Biological Association of the United Kingdom, 90(5), 1025-1032. https://doi.org/10.1017/S0025315409990816
Laviale, M., Barnett, A., Ezequiel, J., Lepetit, B., Frankenbach, S., Méléder, V., Serôdio, J., & Lavaud, J. (2015). Response of intertidal benthic microalgal biofilms to a coupled light–temperature stress: evidence for latitudinal adaptation along the Atlantic coast of Southern Europe. Environmental Microbiology, 17(10), 3662-3677. https://doi.org/10.1111/1462-2920.12728
Li, Z., Li, W., Zhang, Y., Hu, Y., Sheward, R., Irwin, A. J., & Finkel, Z. V. (2021). Dynamic photophysiological stress response of a model diatom to ten environmental stresses. Journal of Phycology, 57(2), 484-495. https://doi.org/10.1111/jpy.13072
MacIntyre, H., & Cullen, J. (1996). Primary production by suspended and benthic microalgae in a turbid estuary:time-scales of variability in San Antonio Bay, Texas. Marine Ecology Progress Series, 145, 245–268. https://doi.org/10.3354/meps145245
Magni, P., & Montani, S. (2006). Seasonal patterns of pore-water nutrients, benthic chlorophyll a and sedimentary AVS in a macrobenthos-rich tidal flat. Hydrobiologia, 571, 297-311. https://doi.org/10.1007/s10750-006-0242-9
McMinn, Sellah, S., Llah, W. A. W. A., Mohammad, M., Merican, F. M. S., Omar, W. M. W., Samad, F., Cheah, W., Idris, I., Sim, Y. K., Wong, W. S., Tan, S. H., & Yasin, Z. (2005). Quantum yield of the marine benthic microflora of near-shore coastal Penang, Malaysia. Marine and Freshwater Research, 56(7), 1047-1053. https://doi.org/10.1071/MF05007
Mitbavkar, S., & Anil, A. (2006). Diatoms of the microphytobenthic community in a tropical intertidal sand flat influenced by monsoons: Spatial and temporal variations. Marine Biology, 148, 693-709. https://doi.org/10.1007/s00227-005-0112-4
Mitbavkar, S., & Anil, A. C. (2002). Diatoms of the microphytobenthic community: Population structure in a tropical intertidal sand flat. Marine Biology, 140, 41-57. https://doi.org/10.1007/s002270100686
Perkins, R. G, Lavaud, J., & Serôdio, J. (2010b). Vertical cell movement is a primary response of intertidal benthic biofilms to increasing light dose. Marine Ecology Progress Series, 416, 93-103. https://hal.archives-ouvertes.fr/hal-01095756/
Perkins, R. G, Oxborough, K., Hanlon, A., Underwood, G., & Baker, N. (2002). Can chlorophyll fluorescence be used to estimate the rate of photosynthetic electron transport within microphytobenthic biofilms? Marine Ecology Progress Series, 228, 47-56. https://doi.org/10.3354/meps228047
Perkins, R. G., Kromkamp, J. C., Serôdio, J., & Lavaud, J. (2010a). The application of variable chlorophyll fluorescence to microphytobenthic biofilms. In D. Suggett, O. Prášil & M. Borowitzka (Eds.), Chlorophyll a Fluorescence in Aquatic Sciences: Methods and Applications (Vol 4, pp. 237-275). Springer. https://doi.org/10.1007/978-90-481-9268-7_12
Perkins, R. G., Mouget, J. L., Lefebvre, S., & Lavaud, J. (2006). Light response curve methodology and possible implications in the application of chlorophyll fluorescence to benthic diatoms. Marine Biology, 149, 703-712. https://doi.org/10.1007/s00227-005-0222-z
Ralph, P. J., & Gademann, R. (2005). Rapid light curves: A powerful tool for the assessment of photosynthetic activity. Aquatic Botany, 82(3), 222-237 https://doi.org/10.1016/j.aquabot.2005.02.006
Ribeiro, L., Brotas, V., Rincé, Y., & Jesus, B. (2013). Structure and diversity of intertidal benthic diatom assemblages in contrasting shores: A case study from the Tagus Estuary. Journal of Phycology, 49(2), 258-270. https://doi.org/10.1111/jpy.12031
Round, F., Crawford, R., & Mann, D. (1990). Diatoms: Biology and Morphology of the Genera. Cambridge University Press.
Salleh, S., & McMinn, A. (2021). Response of tropical marine benthic diatoms exposed to elevated irradiance and temperature. Biogeosciences, 2021, 1-25. https://doi.org/10.5194/bg-2021-18
Schreiber, U. (2004). Pulse-Amplitude Modulation (PAM) fluorometry and saturation pulse method: An overview. In G. C. Papageorgiou & Govindjee (Eds.), Chlorophyll a Fluorescence: A Signature Photosynthesis Advances in Photosynthesis and Respiration (Vol. 19, pp. 279-319). Springer.
Serôdio, J., Cruz, S., Vieira, S., & Brotas, V. (2005). Non-photochemical quenching of chlorophyll fluorescence and operation of the xanthophyll cycle in estuarine microphytobenthos. Journal of Experimental Marine Biology and Ecology, 326(2), 157-169. https://doi.org/10.1016/j.jembe.2005.05.011
Serôdio, J., Ezequiel, J., Barnett, A., Mouget, J., Méléder, V., Laviale, M., & Lavaud, J. (2012). Efficiency of photoprotection in microphytobenthos: role of vertical migration and the xanthophyll cycle against photoinhibition. Aquatic Microbial, 67(2), 161-175. https://doi.org/10.3354/ame01591
Serôdio, J., Vieira, S., Cruz, S., & Coelho, H. (2006). Rapid light-response curves of chlorophyll fluorescence in microalgae: Relationship to steady-state light curves and non-photochemical quenching in benthic diatom-dominated assemblages. Photosynthesis Research, 90, 29-43. https://doi.org/10.1007/s11120-006-9105-5
Stidolph, S. (1980). A record of some coastal marine diatoms from Porirua Harbour, North Island, New Zealand. New Zealand Journal of Botany, 18(3), 376-403. https://doi.org/10.1080/0028825X.1980.10427255
Strickland, J. D. H., & Parsons, T. R. (1968). A practical handbook of seawater analysis. Pigment analysis. Bulletin of Fisheries Research Board of Canada, 167, 185-206.
Thornton, D., Dong, L., Underwood, G., & Nedwell, D. (2002). Factors affecting microphytobenthic biomass, species composition and production in the Colne Estuary (UK). Aquatic Microbial Ecology, 27, 285-300. https://doi.org/10.3354/ame027285
Vieira, S., Cartaxana, P., Máguas, C., & Da Silva, J. M. (2016). Photosynthesis in estuarine intertidal microphytobenthos is limited by inorganic carbon availability. Photosynthesis Research, 128, 85-92. https://doi.org/10.1007/s11120-015-0203-0
Vieira, S., Ribeiro, L., Marques da Silva, J., & Cartaxana, P. (2013). Effects of short-term changes in sediment temperature on the photosynthesis of two intertidal microphytobenthos communities. Estuarine, Coastal and Shelf Science, 119, 112-118. https://doi.org/10.1016/j.ecss.2013.01.001
Witkowski, A. (2000). Diatom flora of marine coasts I. Iconographia Diatomologica, 7, 1-925. http://ci.nii.ac.jp/naid/10020542308/
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e-ISSN 2231-8542