PERTANIKA JOURNAL OF TROPICAL AGRICULTURAL SCIENCE

 

e-ISSN 2231-8542
ISSN 1511-3701

Home / Regular Issue / JTAS Vol. 27 (1) Apr. 2004 / JTAS-0277-2004

 

Intraspecific Polymorphism in Mystus nemurus (C&V) Detected by RAPD-PCR Fingerprinting

Sanga Leesanga, Siti Shapor Siraj, Siti Khalijah Baud, Soon Guan Tan & Sharr Azni Harmin

Pertanika Journal of Tropical Agricultural Science, Volume 27, Issue 1, April 2004

Keywords: Mystus nemurus, catfish, RAPD, PCR, Thailand

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Yellow catfish, Mystus nemurus (C&V), is becoming one of the major freshwater species farmed by aquaculturists in Southeast Asia. It was of interest to examine levels of genetic sub-population differentiation among samples of this species obtained from parts of its range, as well as to compare the genetics of mild and hatchery-bred fish. The genetic aspects of variation in the fish, which were collected from eight wild populations throughout Thailand and a hatchery stock, were determined at molecular (DNA) level using the technique of RAPD-PCR fingerprinting. Five arbitrary primers namely OPA-11, OPA-14, OPA-18, OPA-19 and OPA-20 were chosen to amplify products, which showed 28 polymorphic loci in 9 populations. The highest genetic distance (D) was found between Chainat and Suratthani populations with the value of 0.289, while the lowest was found in Songkhla population and hatchery stock with the value of 0.087. The dendrogram depicts the genetic relationship among populations of M. nemurus, which are grouped into four clusters according to their regional areas.

ISSN 1511-3701

e-ISSN 2231-8542

Article ID

JTAS-0277-2004

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