PERTANIKA JOURNAL OF TROPICAL AGRICULTURAL SCIENCE

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• Kumar, J., Sharma, V. K., Singh, D. K., Mishra, A., Gond, S. K., Verma, S. K., Kumar, A., & Kharwar, R. N. (2016). Epigenetic activation of antibacterial property of an endophytic Streptomyces coelicolor strain AZRA 37 and identification of the induced protein using MALDI TOF MS/MS. PloS One, 11(2), Article e0147876. https://doi.org/10.1371/journal.pone.0147876

• Lauffer, B. E. L., Mintzer, R., Fong, R., Mukund, S., Tam, C., Zilberleyb, I., Flicke, B., Ritscher, A., Fedorowicz, G., Vallero, R., Ortwine, D. F., Gunzner, J., Modrusan, Z., Neumann, L., Koth, C. M., Lupardus, P. J., Kaminker, J. S., Heise, C. E., & Steiner, P. (2013). Histone deacetylase (HDAC) inhibitor kinetic rate constants correlate with cellular histone acetylation but not transcription and cell viability. Journal of Biological Chemistry, 288(37), 26926-26943. https://doi.org/10.1074/jbc.M113.490706

• Le Govic, Y., Papon, N., Le Gal, S., Bouchara, J., & Vandeputte, P. (2019). Non-ribosomal peptide synthetase gene clusters in the human pathogenic fungus Scedosporium apiospermum. Frontiers in Microbiology, 10, Article 2062. https://doi.org/10.3389/fmicb.2019.02062

• Lebedeva, J., Jukneviciute, G., Čepaitė, R., Vickackaite, V., Pranckutė, R., & Kuisiene, N. (2021). Genome mining and characterisation of biosynthetic gene clusters in two cave strains of Paenibacillus sp. Frontiers in Microbiology, 11, Article 612483. https://doi.org/10.3389/fmicb.2020.612483

• Lee, N., Hwang, S., Kim, J., Cho, S., Palsson, B., & Cho, B. K. (2020). Mini review: Genome mining approaches for the identification of secondary metabolite biosynthetic gene clusters in Streptomyces. Computational and Structural Biotechnology Journal, 18, 1548-1556. https://doi.org/10.1016/j.csbj.2020.06.024

• Li, G., Tian, Y., & Zhu, W. (2020). The roles of histone deacetylases and their inhibitors in cancer therapy. Frontiers in Cell and Developmental Biology, 8, Article 576946. https://doi.org/10.3389/fcell.2020.576946

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• Little, R. F., Samborskyy, M., & Leadlay, P. F. (2020). The biosynthetic pathway to tetromadurin (SF2487/A80577), a polyether tetronate antibiotic. PloS One, 15(9), Article e0239054. https://doi.org/10.1371/journal.pone.0239054

• Liu, Z., Zhao, Y., Huang, C., & Luo, Y. (2021). Recent advances in silent gene cluster activation in streptomyces, Frontiers in Bioengineering and Biotechnology, 9, Article 632230. https://doi.org/10.3389/fbioe.2021.632230

• Medema, M. H., Kottmann, R., Yilmaz, P., Cummings, M., Biggins, J. B., Blin, K., de Bruijn, I., Chooi, Y. H., Claesen, J., Coates, R. C., Cruz-Morales, P., Duddela, S., Düsterhus, S., Edwards, D. J., Fewer, D. P., Garg, N., Geiger, C., Gomez-Escribano, J. P., Greule, A., … & Glöckner, F. O. (2015). Minimum information about a biosynthetic gene cluster. Nature Chemical Biology, 11(9), 625-631. https://doi.org/10.1038/nchembio.1890

• Militello, K. T., Simon, R. D., Mandarano, A. H., DiNatale, A., Hennick, S. M., Lazatin, J. C., & Cantatore, S. (2016). 5-azacytidine induces transcriptome changes in Escherichia coli via DNA methylation-dependent and DNA methylation-independent mechanisms. BMC Microbiology, 16, Article 130. https://doi.org/10.1186/s12866-016-0741-4

• Moore, J. M., Bradshaw, E., Seipke, R. F., Hutchings, M. I., & McArthur, M. (2012). Use and discovery of chemical elicitors that stimulate biosynthetic gene clusters in Streptomyces bacteria. Methods in Enzymology, 517, 367-385. https://doi.org/10.1016/B978-0-12-404634-4.00018-8

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• Okada, B. K., & Seyedsayamdost, M. R. (2017). Antibiotic dialogues: Induction of silent biosynthetic gene clusters by exogenous small molecules. FEMS Microbiology Reviews, 41(1), 19-33. https://doi.org/10.1093/femsre/fuw035

• Ou, Y., Zhang, Q., Tang, Y., Lu, Z., Lu, X., Zhou, X., & Liu, C. (2018). DNA methylation enzyme inhibitor RG108 suppresses the radioresistance of esophageal cancer. Oncology Reports, 39(3), 993-1002. https://doi.org/10.3892/or.2018.6210

• Pahalagedara, A. S. N. W., Flint, S., Palmer, J., Brightwell, G., & Gupta, T. B. (2020). Antimicrobial production by strictly anaerobic clostridium spp. International Journal of Antimicrobial Agents, 55(5), Article 105910. https://doi.org/10.1016/j.ijantimicag.2020.105910

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• Pillay, L. C., Nekati, L., Makhwitine, P. J., & Ndlovu, S. I. (2022). Epigenetic activation of silent biosynthetic gene clusters in endophytic fungi using small molecular modifiers. Frontiers in Microbiology, 13, Article 815008. https://doi.org/10.3389/fmicb.2022.815008

• Poças-Fonseca, M. J., Cabral, C. G., & Manfrão-Netto J. H. C. (2020). Epigenetic manipulation of filamentous fungi for biotechnological applications: A systematic review. Biotechnology Letters, 42, 885-904. https://doi.org/10.1007/s10529-020-02871-8

• Ramesha, K., Mohana, N., Nuthan, B., Rakshith, D., & Satish, S. (2018). Epigenetic modulations of mycoendophytes for novel bioactive molecules. Biocatalysis and Agricultural Biotechnology, 16, 663-668. https://doi.org/10.1016/j.bcab.2018.09.025

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• Scherlach, K., & Hertweck, C. (2021). Mining and unearthing hidden biosynthetic potential. Nature Communication, 12, Article 3864. https://doi.org/10.1038/s41467-021-24133-5

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• Shah, A. M., Shakeel-U-Rehman, Hussain, A., Mushtaq, S., Rather, M. A., Shah, A., Ahmad, Z., Khan, I. A., Bhat, K. A., & Hassan, Q. P. (2017). Antimicrobial investigation of selected soil actinomycetes isolated from unexplored regions of Kashmir Himalayas, India. Microbial Pathogenesis, 110, 93-99. https://doi.org/10.1016/j.micpath.2017.06.017

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• Tanaka, Y., Kasahara, K., Hirose, Y., Murakami, K., Kugimiya, R., & Ochi, K. (2013). Activation and products of the cryptic secondary metabolite biosynthetic gene clusters by rifampin resistance (rpoB) mutations in actinomycetes. Journal of Bacteriology, 195(13), 2959-2970. https://doi.org/10.1128/JB.00147-13

• Trautman, E. P., & Crawford, J. M. (2016). Linking biosynthetic gene clusters to their metabolites via pathway-targeted molecular networking. Current Topics in Medicinal Chemistry, 16(15), 1705-1716. https://doi.org/10.2174/1568026616666151012111046

• Vandenbussche, I., Sass, A., Pinto-Carbó, M., Mannweiler, O., Eberl, L., & Coenye, T. (2020). DNA methylation epigenetically regulates gene expression in Burkholderia cenocepacia and controls biofilm formation, cell aggregation, and motility. Molecular Biolody and Physiology, 5(4), Article e00455-20. https://doi.org/10.1128/mSphere.00455-20

• Wang, B., Waters, A. L., Sims, J. W., Fullmer, A., Ellison, S., & Hamann, M. T. (2013). Complex marine natural products as potential epigenetic and production regulators of antibiotics from a marine Pseudomonas aeruginosa. Microbial Ecology, 65, 1068-1075. https://doi.org/10.1007/s00248-013-0213-4

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• Yang, K., Tian, J., & Keller, N. P. (2022). Post-translational modifications drive secondary metabolite biosynthesis in aspergillus: A review. Environmental Microbiology, 24(7), 2857-2881. https://doi.org/10.1111/1462-2920.16034

• Zhang, Y., Chen, M., Bruner, S., & Ding, Y. (2018). Heterologous production of microbial ribosomally synthesised and post-translationally modified peptides. Frontiers in Microbiology, 9, Article 1801. https://doi.org/10.3389/fmicb.2018.01801